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PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105826035, updated on 13-Mar-2024

Summary

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Gene symbol
PLOD3
Gene description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
See related
Ensembl:ENSPCOG00000015483
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See PLOD3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012154619.1 (111697..119058, complement)

NW_012154619.1Genomic Context describing neighboring genes Neighboring gene N-acetyltransferase 16 (putative) Neighboring gene monoacylglycerol O-acyltransferase 3 Neighboring gene zinc finger HIT-type containing 1 Neighboring gene claudin 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012154619.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012154619.1 Reference Pcoq_1.0 Primary Assembly

    Range
    111697..119058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012663949.1 → XP_012519403.1  procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

    UniProtKB/TrEMBL
    A0A2K6F341
    Related
    ENSPCOP00000008406.1, ENSPCOT00000018959.1
    Conserved Domains (1) summary
    smart00702
    Location:576 → 739
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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