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ATRNL1 attractin like 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105825975, updated on 13-Mar-2024

Summary

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Gene symbol
ATRNL1
Gene description
attractin like 1
See related
Ensembl:ENSPCOG00000000665
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See ATRNL1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012154618.1 (760152..1499463, complement)

NW_012154618.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 172 Neighboring gene GDNF family receptor alpha 1 Neighboring gene TruB pseudouridine synthase family member 1 Neighboring gene FHF complex subunit HOOK interacting protein 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012154618.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
attractin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012154618.1 Reference Pcoq_1.0 Primary Assembly

    Range
    760152..1499463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012663875.1 → XP_012519329.1  attractin-like protein 1

    UniProtKB/TrEMBL
    A0A2K6EF24
    Related
    ENSPCOP00000000326.1, ENSPCOT00000000920.1
    Conserved Domains (8) summary
    cd03597
    Location:745 → 871
    CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
    cd00041
    Location:98 → 213
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00055
    Location:1010 → 1055
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    sd00038
    Location:310 → 356
    Kelch; KELCH repeat [structural motif]
    pfam01437
    Location:886 → 935
    PSI; Plexin repeat
    pfam13418
    Location:473 → 519
    Kelch_4; Galactose oxidase, central domain
    pfam13854
    Location:357 → 397
    Kelch_5; Kelch motif
    cl19567
    Location:240 → 285
    DSL; Delta serrate ligand
Nucleotide Protein
Heading Accession and Version

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