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CTBS chitobiase [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105823862, updated on 13-Mar-2024

Summary

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Gene symbol
CTBS
Gene description
chitobiase
See related
Ensembl:ENSPCOG00000021717
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See CTBS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012153062.1 (13767298..13790221)

NW_012153062.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidic acid receptor 3 Neighboring gene SSX family member 2 interacting protein Neighboring gene spermatogenesis associated 1 Neighboring gene uncharacterized LOC105823863

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012153062.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
di-N-acetylchitobiase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012153062.1 Reference Pcoq_1.0 Primary Assembly

    Range
    13767298..13790221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012661129.1 → XP_012516583.1  di-N-acetylchitobiase isoform X2

    UniProtKB/TrEMBL
    A0A2K6FZZ6
    Conserved Domains (2) summary
    cd02875
    Location:37 → 367
    GH18_chitobiase; Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. ...
    smart00636
    Location:107 → 347
    Glyco_18; Glyco_18 domain

  2. XM_012661128.1 → XP_012516582.1  di-N-acetylchitobiase isoform X1

    UniProtKB/TrEMBL
    A0A2K6FZZ6
    Related
    ENSPCOP00000019541.1, ENSPCOT00000030191.1
    Conserved Domains (2) summary
    cd02875
    Location:37 → 375
    GH18_chitobiase; Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes. ...
    smart00636
    Location:112 → 355
    Glyco_18; Glyco_18 domain
Nucleotide Protein
Heading Accession and Version

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