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CNTN2 contactin 2 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105821188, updated on 13-Mar-2024

Summary

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Gene symbol
CNTN2
Gene description
contactin 2
See related
Ensembl:ENSPCOG00000023113
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See CNTN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012151541.1 (1168902..1187434, complement)

NW_012151541.1Genomic Context describing neighboring genes Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit Neighboring gene transmembrane protein 81 Neighboring gene neurofascin Neighboring gene leucine rich repeat neuronal 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012151541.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012151541.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1168902..1187434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012657841.1 → XP_012513295.1  contactin-2

    UniProtKB/TrEMBL
    A0A2K6G775, A0A2K6G778
    Related
    ENSPCOP00000022084.1, ENSPCOT00000032755.1
    Conserved Domains (9) summary
    cd04968
    Location:239 → 324
    Ig3_Contactin_like; Third Ig domain of contactin
    cd04969
    Location:433 → 505
    Ig5_Contactin_like; Fifth Ig domain of contactin
    cd05727
    Location:131 → 228
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05728
    Location:328 → 412
    Ig4_Contactin-2-like; Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05854
    Location:524 → 603
    Ig6_Contactin-2; Sixth Ig domain of contactin-2
    smart00410
    Location:246 → 323
    IG_like; Immunoglobulin like
    cd00063
    Location:815 → 907
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:327 → 412
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:36 → 129
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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