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GALNT16 polypeptide N-acetylgalactosaminyltransferase 16 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105819782, updated on 13-Mar-2024

Summary

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Gene symbol
GALNT16
Gene description
polypeptide N-acetylgalactosaminyltransferase 16
See related
Ensembl:ENSPCOG00000005160
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See GALNT16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012150840.1 (9701065..9785068)

NW_012150840.1Genomic Context describing neighboring genes Neighboring gene DDB1 and CUL4 associated factor 5 Neighboring gene exonuclease 3'-5' domain containing 2 Neighboring gene ERH mRNA splicing and mitosis factor Neighboring gene solute carrier family 39 member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012150840.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012150840.1 Reference Pcoq_1.0 Primary Assembly

    Range
    9701065..9785068
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012656101.1 → XP_012511555.1  polypeptide N-acetylgalactosaminyltransferase 16

    UniProtKB/TrEMBL
    A0A2K6EIU0, A0A2K6EIV0
    Related
    ENSPCOP00000001650.1, ENSPCOT00000005850.1
    Conserved Domains (4) summary
    cd02510
    Location:126 → 420
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:126 → 406
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:441 → 543
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:432 → 543
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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