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TREH trehalase [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105819208, updated on 13-Mar-2024

Summary

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Gene symbol
TREH
Gene description
trehalase
See related
Ensembl:ENSPCOG00000023875
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See TREH in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012150585.1 (987105..1005229, complement)

NW_012150585.1Genomic Context describing neighboring genes Neighboring gene archain 1 Neighboring gene pleckstrin homology like domain family B member 1 Neighboring gene RRP15-like protein Neighboring gene DEAD-box helicase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012150585.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trehalase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012150585.1 Reference Pcoq_1.0 Primary Assembly

    Range
    987105..1005229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012655400.1 → XP_012510854.1  trehalase isoform X2

    UniProtKB/TrEMBL
    A0A2K6GB50
    Related
    ENSPCOP00000023465.1, ENSPCOT00000034144.1
    Conserved Domains (1) summary
    pfam01204
    Location:46 → 519
    Trehalase; Trehalase

  2. XM_012655399.1 → XP_012510853.1  trehalase isoform X1

    UniProtKB/TrEMBL
    A0A2K6GB44
    Related
    ENSPCOP00000023464.1, ENSPCOT00000034143.1
    Conserved Domains (1) summary
    pfam01204
    Location:46 → 550
    Trehalase; Trehalase
Nucleotide Protein
Heading Accession and Version

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