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CLGN calmegin [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105818624, updated on 13-Mar-2024

Summary

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Gene symbol
CLGN
Gene description
calmegin
See related
Ensembl:ENSPCOG00000013430
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See CLGN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012135192.1 (4465063..4510908, complement)

NW_012135192.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-alpha 1 pseudogene Neighboring gene short coiled-coil protein Neighboring gene MGAT4 family member D Neighboring gene ELMO domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012135192.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmegin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012135192.1 Reference Pcoq_1.0 Primary Assembly

    Range
    4465063..4510908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012654706.1 → XP_012510160.1  calmegin

    UniProtKB/TrEMBL
    A0A2K6ETZ2
    Related
    ENSPCOP00000005173.1, ENSPCOT00000015526.1
    Conserved Domains (1) summary
    pfam00262
    Location:29 → 393
    Calreticulin; Calreticulin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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