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CERS5 ceramide synthase 5 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105818316, updated on 13-Mar-2024

Summary

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Gene symbol
CERS5
Gene description
ceramide synthase 5
See related
Ensembl:ENSPCOG00000005534
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See CERS5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012135081.1 (1242558..1279250, complement)

NW_012135081.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly protein COX14 Neighboring gene glycerol-3-phosphate dehydrogenase 1 Neighboring gene 60S ribosomal protein L7-like Neighboring gene LIM domain and actin binding 1 Neighboring gene family with sequence similarity 186 member A Neighboring gene 39S ribosomal protein L22, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012135081.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012135081.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1242558..1279250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012654277.1 → XP_012509731.1  ceramide synthase 5

    UniProtKB/TrEMBL
    A0A2K6EJ57
    Related
    ENSPCOP00000001768.1, ENSPCOT00000006244.1
    Conserved Domains (2) summary
    cd00086
    Location:89 → 136
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:140 → 333
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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