U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FUCA1 alpha-L-fucosidase 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105815682, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
FUCA1
Gene description
alpha-L-fucosidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FUCA1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012149075.1 (2126230..2145366, complement)

NW_012149075.1Genomic Context describing neighboring genes Neighboring gene UDP-galactose-4-epimerase Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene cannabinoid receptor 2 Neighboring gene proline rich nuclear receptor coactivator 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012149075.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: tissue alpha-L-fucosidase
Names
fucosidase, alpha-L- 1, tissue

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012149075.1 Reference Pcoq_1.0 Primary Assembly

    Range
    2126230..2145366 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012650887.1 → XP_012506341.1  LOW QUALITY PROTEIN: tissue alpha-L-fucosidase

    UniProtKB/TrEMBL
    A0A2K6F1D1
    Conserved Domains (3) summary
    smart00812
    Location:30 → 408
    Alpha_L_fucos; Alpha-L-fucosidase
    COG3669
    Location:60 → 380
    AfuC; Alpha-L-fucosidase [Carbohydrate transport and metabolism]
    pfam16757
    Location:379 → 460
    Fucosidase_C; Alpha-L-fucosidase C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.