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LCT lactase [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105815373, updated on 13-Mar-2024

Summary

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Gene symbol
LCT
Gene description
lactase
See related
Ensembl:ENSPCOG00000025001
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See LCT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012148952.1 (5281072..5326376)

NW_012148952.1Genomic Context describing neighboring genes Neighboring gene nucleophosmin-like Neighboring gene aspartyl-tRNA synthetase 1 Neighboring gene minichromosome maintenance complex component 6 Neighboring gene UBX domain protein 4 Neighboring gene R3H domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012148952.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactase-phlorizin hydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012148952.1 Reference Pcoq_1.0 Primary Assembly

    Range
    5281072..5326376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012650517.1 → XP_012505971.1  lactase-phlorizin hydrolase

    UniProtKB/TrEMBL
    A0A2K6GH27
    Related
    ENSPCOP00000025537.1, ENSPCOT00000036230.1
    Conserved Domains (2) summary
    pfam00232
    Location:1376 → 1843
    Glyco_hydro_1; Glycosyl hydrolase family 1
    cl23725
    Location:85 → 222
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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