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PLA2G4A phospholipase A2 group IVA [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105813188, updated on 13-Mar-2024

Summary

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Gene symbol
PLA2G4A
Gene description
phospholipase A2 group IVA
See related
Ensembl:ENSPCOG00000015808
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See PLA2G4A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012148286.1 (1251203..1409535, complement)

NW_012148286.1Genomic Context describing neighboring genes Neighboring gene immunoglobulin-binding protein 1 pseudogene Neighboring gene prostaglandin-endoperoxide synthase 2 Neighboring gene phosducin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012148286.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012148286.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1251203..1409535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012647830.1 → XP_012503284.1  cytosolic phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A2K6F4V0
    Related
    ENSPCOP00000008983.1, ENSPCOT00000019543.1
    Conserved Domains (3) summary
    cd07200
    Location:144 → 730
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 138
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    smart00022
    Location:117 → 669
    PLAc; Cytoplasmic phospholipase A2, catalytic subunit

  2. XM_012647831.1 → XP_012503285.1  cytosolic phospholipase A2 isoform X2

    Conserved Domains (3) summary
    cd07200
    Location:109 → 670
    cPLA2_Grp-IVA; Group IVA cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:20 → 129
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    pfam01735
    Location:130 → 614
    PLA2_B; Lysophospholipase catalytic domain
Nucleotide Protein
Heading Accession and Version

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