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EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105806760, updated on 13-Mar-2024

Summary

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Gene symbol
EDEM3
Gene description
ER degradation enhancing alpha-mannosidase like protein 3
See related
Ensembl:ENSPCOG00000023231
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See EDEM3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012138969.1 (1443102..1564148)

NW_012138969.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 58-like Neighboring gene niban apoptosis regulator 1 Neighboring gene uncharacterized LOC105806797 Neighboring gene tRNA splicing endonuclease subunit 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012138969.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum mannose trimming IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ER degradation-enhancing alpha-mannosidase-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012138969.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1443102..1564148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012639963.1 → XP_012495417.1  ER degradation-enhancing alpha-mannosidase-like protein 3

    UniProtKB/TrEMBL
    A0A2K6G7S8
    Related
    ENSPCOP00000022285.1, ENSPCOT00000032957.1
    Conserved Domains (2) summary
    cl04955
    Location:88 → 381
    LanC_like; Cyclases involved in the biosynthesis of lantibiotics, and similar proteins
    cl10459
    Location:416 → 470
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
Nucleotide Protein
Heading Accession and Version

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