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PRNP prion protein (Kanno blood group) [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105806197, updated on 13-Mar-2024

Summary

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Gene symbol
PRNP
Gene description
prion protein (Kanno blood group)
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See PRNP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012138191.1 (4885517..4903961, complement)

NW_012138191.1Genomic Context describing neighboring genes Neighboring gene isopentenyl-diphosphate Delta-isomerase 1-like Neighboring gene prion like protein doppel Neighboring gene L-lactate dehydrogenase B chain pseudogene Neighboring gene baculoviral IAP repeat-containing protein 5 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012138191.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein homooligomerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major prion protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012138191.1 Reference Pcoq_1.0 Primary Assembly

    Range
    4885517..4903961 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012639269.1 → XP_012494723.1  major prion protein

    See identical proteins and their annotated locations for XP_012494723.1

    Conserved Domains (3) summary
    smart00157
    Location:23 → 241
    PRP; Major prion protein
    pfam00377
    Location:135 → 252
    Prion; Prion/Doppel alpha-helical domain
    pfam11587
    Location:4 → 28
    Prion_bPrPp; Major prion protein bPrPp - N terminal

  2. XM_012639270.1 → XP_012494724.1  major prion protein

    See identical proteins and their annotated locations for XP_012494724.1

    Conserved Domains (3) summary
    smart00157
    Location:23 → 241
    PRP; Major prion protein
    pfam00377
    Location:135 → 252
    Prion; Prion/Doppel alpha-helical domain
    pfam11587
    Location:4 → 28
    Prion_bPrPp; Major prion protein bPrPp - N terminal
Nucleotide Protein
Heading Accession and Version

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