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SRRT serrate, RNA effector molecule [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105806027, updated on 13-Mar-2024

Summary

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Gene symbol
SRRT
Gene description
serrate, RNA effector molecule
See related
Ensembl:ENSPCOG00000025751
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See SRRT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012137969.1 (80877..93185, complement)

NW_012137969.1Genomic Context describing neighboring genes Neighboring gene acetylcholinesterase (Cartwright blood group) Neighboring gene UFM1 specific peptidase 1 Neighboring gene thyroid hormone receptor interactor 6 Neighboring gene solute carrier family 12 member 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012137969.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in primary miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serrate RNA effector molecule homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012137969.1 Reference Pcoq_1.0 Primary Assembly

    Range
    80877..93185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012639053.1 → XP_012494507.1  serrate RNA effector molecule homolog isoform X2

    UniProtKB/TrEMBL
    A0A2K6GKE4
    Conserved Domains (2) summary
    pfam04959
    Location:645 → 850
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

  2. XM_012639051.1 → XP_012494505.1  serrate RNA effector molecule homolog isoform X1

    UniProtKB/TrEMBL
    A0A2K6GKE4, A0A2K6GKH7
    Related
    ENSPCOP00000026709.1, ENSPCOT00000037478.1
    Conserved Domains (2) summary
    pfam04959
    Location:646 → 851
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

  3. XM_012639054.1 → XP_012494508.1  serrate RNA effector molecule homolog isoform X3

    UniProtKB/TrEMBL
    A0A2K6GKE4
    Related
    ENSPCOP00000026719.1, ENSPCOT00000037489.1
    Conserved Domains (2) summary
    pfam04959
    Location:646 → 847
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

  4. XM_012639055.1 → XP_012494509.1  serrate RNA effector molecule homolog isoform X4

    UniProtKB/TrEMBL
    A0A2K6GKE4
    Related
    ENSPCOP00000026721.1, ENSPCOT00000037491.1
    Conserved Domains (2) summary
    pfam04959
    Location:645 → 846
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)
Nucleotide Protein
Heading Accession and Version

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