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RAC1 Rac family small GTPase 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105805988, updated on 13-Mar-2024

Summary

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Gene symbol
RAC1
Gene description
Rac family small GTPase 1
See related
Ensembl:ENSPCOG00000020411
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See RAC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012137969.1 (2944305..2965629)

NW_012137969.1Genomic Context describing neighboring genes Neighboring gene thioredoxin-like Neighboring gene family with sequence similarity 220 member A Neighboring gene diacylglycerol lipase beta Neighboring gene KDEL endoplasmic reticulum protein retention receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012137969.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cortical cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment or maintenance of cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in motor neuron axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell cortex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related C3 botulinum toxin substrate 1
Names
ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012137969.1 Reference Pcoq_1.0 Primary Assembly

    Range
    2944305..2965629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012638986.1 → XP_012494440.1  ras-related C3 botulinum toxin substrate 1 isoform X2

    See identical proteins and their annotated locations for XP_012494440.1

    UniProtKB/TrEMBL
    A0A2K6FTA9, A0A2K6FTC0
    Related
    ENSPCOP00000017224.1, ENSPCOT00000027859.1
    Conserved Domains (1) summary
    cd01871
    Location:3 → 195
    Rac1_like; Ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)-like consists of Rac1, Rac2 and Rac3

  2. XM_012638985.1 → XP_012494439.1  ras-related C3 botulinum toxin substrate 1 isoform X1

    See identical proteins and their annotated locations for XP_012494439.1

    UniProtKB/TrEMBL
    A0A2K6FTB6, A0A2K6FTC0
    Related
    ENSPCOP00000017226.1, ENSPCOT00000027861.1
    Conserved Domains (1) summary
    cd01871
    Location:3 → 176
    Rac1_like; Ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)-like consists of Rac1, Rac2 and Rac3
Nucleotide Protein
Heading Accession and Version

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