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XYLB xylulokinase [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105805846, updated on 11-Apr-2024

Summary

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Gene symbol
XYLB
Gene description
xylulokinase
See related
Ensembl:ENSPCOG00000025871
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See XYLB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012133857.1 (2334924..2379703)

NW_012133857.1Genomic Context describing neighboring genes Neighboring gene oxidative stress responsive kinase 1 Neighboring gene solute carrier family 22 member 13-like Neighboring gene cysteine and glycine-rich protein 2 pseudogene Neighboring gene activin A receptor type 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012133857.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylulokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xylulose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
xylulose kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012133857.1 Reference Pcoq_1.0 Primary Assembly

    Range
    2334924..2379703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012638809.1 → XP_012494263.1  xylulose kinase isoform X2

    Conserved Domains (2) summary
    cd07776
    Location:1 → 413
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases
    TIGR01312
    Location:2 → 457
    XylB; D-xylulose kinase

  2. XM_012638800.1 → XP_012494254.1  xylulose kinase isoform X1

    UniProtKB/TrEMBL
    A0A2K6GL20
    Related
    ENSPCOP00000026904.1, ENSPCOT00000037690.1
    Conserved Domains (2) summary
    PLN02669
    Location:11 → 528
    PLN02669; xylulokinase
    cd07776
    Location:9 → 479
    FGGY_D-XK_euk; eukaryotic D-xylulose kinases; a subfamily of the FGGY family of carbohydrate kinases
Nucleotide Protein
Heading Accession and Version

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