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PMM1 phosphomannomutase 1 [ Propithecus coquereli (Coquerel's sifaka) ]

Gene ID: 105805229, updated on 13-Mar-2024

Summary

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Gene symbol
PMM1
Gene description
phosphomannomutase 1
See related
Ensembl:ENSPCOG00000020073
Gene type
protein coding
RefSeq status
MODEL
Organism
Propithecus coquereli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus
Orthologs
human mouse all
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Genomic context

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See PMM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Pcoq_1.0 (GCF_000956105.1) Unplaced Scaffold NW_012136747.1 (1794657..1812249)

NW_012136747.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105805227 Neighboring gene desumoylating isopeptidase 1 Neighboring gene cold shock domain containing C2 Neighboring gene RNA polymerase III subunit H Neighboring gene aconitase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012136747.1 Unplaced Scaffold Reference Pcoq_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphomannomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphomannomutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Propithecus coquereli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pcoq_1.0 Primary Assembly

Genomic

  1. NW_012136747.1 Reference Pcoq_1.0 Primary Assembly

    Range
    1794657..1812249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012638077.1 → XP_012493531.1  phosphomannomutase 1 isoform X2

    Conserved Domains (2) summary
    COG0561
    Location:15 → 219
    Cof; Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases [Coenzyme transport and metabolism, General function prediction only]
    cl21460
    Location:38 → 222
    HAD_like; Haloacid Dehalogenase-like Hydrolases

  2. XM_012638076.1 → XP_012493530.1  phosphomannomutase 1 isoform X1

    UniProtKB/TrEMBL
    A0A2K6FRJ7
    Related
    ENSPCOP00000016593.1, ENSPCOT00000027223.1
    Conserved Domains (2) summary
    TIGR01484
    Location:17 → 238
    HAD-SF-IIB; HAD-superfamily hydrolase, subfamily IIB
    pfam03332
    Location:38 → 256
    PMM; Eukaryotic phosphomannomutase
Nucleotide Protein
Heading Accession and Version

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