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LOC105803962 UDP-glycosyltransferase TURAN [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105803962, updated on 10-Oct-2024

Summary

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Gene symbol
LOC105803962
Gene description
UDP-glycosyltransferase TURAN
Locus tag
B456_007G217900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105803962 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
19
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (38776842..38799459, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (24756824..24794866)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene transcription factor MYB73 Neighboring gene putative oxidoreductase TDA3 Neighboring gene uncharacterized LOC105803963 Neighboring gene UDP-glycosyltransferase TURAN-like Neighboring gene secreted RxLR effector protein 161-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glycosyltransferase TURAN

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    38776842..38799459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052623761.1 → XP_052479721.1  UDP-glycosyltransferase TURAN

    UniProtKB/TrEMBL
    A0A0D2SHW2

  2. XM_012636429.2 → XP_012491883.1  UDP-glycosyltransferase TURAN

    See identical proteins and their annotated locations for XP_012491883.1

    UniProtKB/TrEMBL
    A0A0D2SHW2, A0A0D2SPA1
    Conserved Domains (2) summary
    cd03816
    Location:2 → 467
    GT1_ALG1_like; This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and ...
    PLN02275
    Location:1 → 429
    PLN02275; transferase, transferring glycosyl groups
Nucleotide Protein
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