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LOC105803005 probable pectinesterase/pectinesterase inhibitor 7 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105803005, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105803005
Gene description
probable pectinesterase/pectinesterase inhibitor 7
Locus tag
B456_007G127100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105803005 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (53060105..53062080, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (10127642..10129528)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L18-2 Neighboring gene RING-H2 finger protein ATL5 Neighboring gene pectinesterase Neighboring gene endoglucanase 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable pectinesterase/pectinesterase inhibitor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    53060105..53062080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012634937.2 → XP_012490391.1  probable pectinesterase/pectinesterase inhibitor 7

    See identical proteins and their annotated locations for XP_012490391.1

    UniProtKB/TrEMBL
    A0A0D2TDZ3
    Conserved Domains (3) summary
    PLN02713
    Location:1 → 559
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    cd15798
    Location:33 → 185
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    pfam01095
    Location:246 → 544
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases