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LOC105802586 pectinesterase 2 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105802586, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105802586
Gene description
pectinesterase 2
Locus tag
B456_007G090100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105802586 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 11 NC_068575.1 (56631006..56634131)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 7 NC_026935.1 (6566843..6569764, complement)

Chromosome 11 - NC_068575.1Genomic Context describing neighboring genes Neighboring gene protein GRAVITROPIC IN THE LIGHT 1 Neighboring gene pectinesterase inhibitor 9 Neighboring gene plasmodesmata-located protein 8 Neighboring gene auxin-responsive protein SAUR36

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068575.1 Reference ASM2569854v1 Primary Assembly

    Range
    56631006..56634131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012634298.2 → XP_012489752.1  pectinesterase 2

    See identical proteins and their annotated locations for XP_012489752.1

    UniProtKB/TrEMBL
    A0A0D2S9X3
    Conserved Domains (3) summary
    PLN02301
    Location:6 → 519
    PLN02301; pectinesterase/pectinesterase inhibitor
    pfam01095
    Location:208 → 505
    Pectinesterase; Pectinesterase
    pfam04043
    Location:29 → 172
    PMEI; Plant invertase/pectin methylesterase inhibitor
Nucleotide Protein
Heading Accession and Version

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