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LOC105793014 probable sucrose-phosphate synthase 1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105793014, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105793014
Gene description
probable sucrose-phosphate synthase 1
Locus tag
B456_004G292800
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105793014 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 8 NC_068572.1 (62528752..62534240, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 4 NC_026932.1 (62058053..62063625, complement)

Chromosome 8 - NC_068572.1Genomic Context describing neighboring genes Neighboring gene DEAD-box ATP-dependent RNA helicase 15 Neighboring gene ethylene-responsive transcription factor SHINE 2 Neighboring gene hydroxyproline O-galactosyltransferase HPGT3 Neighboring gene heparanase-like protein 3 Neighboring gene uncharacterized LOC105793018

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sucrose-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable sucrose-phosphate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068572.1 Reference ASM2569854v1 Primary Assembly

    Range
    62528752..62534240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012621926.2 → XP_012477380.1  probable sucrose-phosphate synthase 1

    See identical proteins and their annotated locations for XP_012477380.1

    UniProtKB/TrEMBL
    A0A0D2N5C1, A0A0D2PK07
    Conserved Domains (2) summary
    cd03800
    Location:167 → 662
    GT1_Sucrose_synthase; This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose ...
    TIGR02468
    Location:1 → 1044
    sucrsPsyn_pln; sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant
Nucleotide Protein
Heading Accession and Version

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