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LOC105789181 GPI mannosyltransferase 1 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105789181, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105789181
Gene description
GPI mannosyltransferase 1
Locus tag
B456_001G088100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105789181 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 7 NC_068571.1 (43926945..43930682, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 1 NC_026929.1 (9552870..9556368)

Chromosome 7 - NC_068571.1Genomic Context describing neighboring genes Neighboring gene equilibrative nucleotide transporter 1-like Neighboring gene CST complex subunit STN1 Neighboring gene protein SOB FIVE-LIKE 4-like Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-mannosyltransferase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068571.1 Reference ASM2569854v1 Primary Assembly

    Range
    43926945..43930682 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012616460.2 → XP_012471914.1  GPI mannosyltransferase 1

    See identical proteins and their annotated locations for XP_012471914.1

    UniProtKB/TrEMBL
    A0A0D2PP24
    Conserved Domains (1) summary
    PLN02841
    Location:4 → 423
    PLN02841; GPI mannosyltransferase
Nucleotide Protein
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