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LOC105788654 probable endo-1,3(4)-beta-glucanase ARB_01444 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105788654, updated on 18-Sep-2024

Summary

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Gene symbol
LOC105788654
Gene description
probable endo-1,3(4)-beta-glucanase ARB_01444
Locus tag
B456_001G082200
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105788654 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 7 NC_068571.1 (44778368..44780876, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 1 NC_026929.1 (8708056..8710636)

Chromosome 7 - NC_068571.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128042569 Neighboring gene cinnamoyl-CoA reductase-like SNL6 Neighboring gene uncharacterized LOC128042320 Neighboring gene protein FLX-like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endo-1,3(4)-beta-glucanase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable endo-1,3(4)-beta-glucanase ARB_01444
Names
putative endo-1,3(4)-beta-glucanase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068571.1 Reference ASM2569854v1 Primary Assembly

    Range
    44778368..44780876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012615623.2 → XP_012471077.1  probable endo-1,3(4)-beta-glucanase ARB_01444

    See identical proteins and their annotated locations for XP_012471077.1

    UniProtKB/TrEMBL
    A0A0D2PNP6
    Conserved Domains (1) summary
    pfam03639
    Location:62 → 706
    Glyco_hydro_81; Glycosyl hydrolase family 81
Nucleotide Protein
Heading Accession and Version

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