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LOC105787462 probable L-ascorbate peroxidase 3 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105787462, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105787462
Gene description
probable L-ascorbate peroxidase 3
Locus tag
B456_003G008200
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 2 NC_068566.1 (498543..501670)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 3 NC_026931.1 (497142..500311)

Chromosome 2 - NC_068566.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105787460 Neighboring gene rac-like GTP-binding protein RHO1 Neighboring gene proteasome subunit alpha type-7 Neighboring gene histidine kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to reactive oxygen species IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable L-ascorbate peroxidase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068566.1 Reference ASM2569854v1 Primary Assembly

    Range
    498543..501670
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012613853.2 → XP_012469307.1  probable L-ascorbate peroxidase 3

    See identical proteins and their annotated locations for XP_012469307.1

    UniProtKB/TrEMBL
    A0A0D2NUK1
    Conserved Domains (2) summary
    cd00691
    Location:3 → 245
    ascorbate_peroxidase; Ascorbate peroxidases and cytochrome C peroxidases
    PLN02608
    Location:1 → 275
    PLN02608; L-ascorbate peroxidase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases