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LOC105785676 pectinesterase [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105785676, updated on 6-Jun-2024

Summary

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Gene symbol
LOC105785676
Gene description
pectinesterase
Locus tag
B456_002G176100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105785676 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 1 NC_068565.1 (34597173..34599113)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 2 NC_026930.1 (44930073..44932370)

Chromosome 1 - NC_068565.1Genomic Context describing neighboring genes Neighboring gene 21 kDa protein Neighboring gene pectinesterase Neighboring gene uncharacterized LOC128042420 Neighboring gene uncharacterized LOC128039717 Neighboring gene phosphoglucomutase, cytoplasmic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: pectinesterase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068565.1 Reference ASM2569854v1 Primary Assembly

    Range
    34597173..34599113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012611795.2 → XP_012467249.2  LOW QUALITY PROTEIN: pectinesterase

    UniProtKB/TrEMBL
    A0A0D2MCC2
Nucleotide Protein
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