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LOC105778345 type IV inositol polyphosphate 5-phosphatase 7 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105778345, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105778345
Gene description
type IV inositol polyphosphate 5-phosphatase 7
Locus tag
B456_011G165500
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105778345 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 10 NC_068574.1 (32711898..32717281, complement)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 11 NC_026939.1 (32527243..32532736, complement)

Chromosome 10 - NC_068574.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT Neighboring gene uncharacterized LOC128033945 Neighboring gene uncharacterized LOC105775438

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type IV inositol polyphosphate 5-phosphatase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068574.1 Reference ASM2569854v1 Primary Assembly

    Range
    32711898..32717281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012602029.2 → XP_012457483.1  type IV inositol polyphosphate 5-phosphatase 7 isoform X2

    Conserved Domains (1) summary
    cl00490
    Location:17 → 563
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

  2. XM_012602028.2 → XP_012457482.1  type IV inositol polyphosphate 5-phosphatase 7 isoform X1

    See identical proteins and their annotated locations for XP_012457482.1

    UniProtKB/TrEMBL
    A0A0D2T915
    Conserved Domains (1) summary
    cl00490
    Location:17 → 570
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

  3. XM_052621770.1 → XP_052477730.1  type IV inositol polyphosphate 5-phosphatase 7 isoform X1

    UniProtKB/TrEMBL
    A0A0D2T915

  4. XM_012602027.2 → XP_012457481.1  type IV inositol polyphosphate 5-phosphatase 7 isoform X1

    See identical proteins and their annotated locations for XP_012457481.1

    UniProtKB/TrEMBL
    A0A0D2T915
    Conserved Domains (1) summary
    cl00490
    Location:17 → 570
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
Nucleotide Protein
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