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LOC105776704 cellulose synthase A catalytic subunit 8 [UDP-forming] [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105776704, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105776704
Gene description
cellulose synthase A catalytic subunit 8 [UDP-forming]
Locus tag
B456_011G037900
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Also known as
CelA1
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Genomic context

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See LOC105776704 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 10 NC_068574.1 (2818527..2822927)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 11 NC_026939.1 (2845646..2849991)

Chromosome 10 - NC_068574.1Genomic Context describing neighboring genes Neighboring gene probable disease resistance protein At5g43740 Neighboring gene uncharacterized LOC105776705 Neighboring gene receptor-like protein 51 Neighboring gene pentatricopeptide repeat-containing protein DOT4, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 8 [UDP-forming]
Names
cellulose synthase A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068574.1 Reference ASM2569854v1 Primary Assembly

    Range
    2818527..2822927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012599550.2 → XP_012455004.1  cellulose synthase A catalytic subunit 8 [UDP-forming]

    See identical proteins and their annotated locations for XP_012455004.1

    UniProtKB/TrEMBL
    A0A0D2RGG6, B2ZAR7
    Conserved Domains (1) summary
    PLN02195
    Location:1 → 974
    PLN02195; cellulose synthase A
Nucleotide Protein
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