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LOC105770660 uncharacterized LOC105770660 [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105770660, updated on 10-Oct-2024

Summary

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Gene symbol
LOC105770660
Gene description
uncharacterized LOC105770660
Locus tag
B456_009G301800
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105770660 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 5 NC_068569.1 (27262314..27267084)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 9 NC_026937.1 (27051524..27056283)

Chromosome 5 - NC_068569.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105770658 Neighboring gene inactive protein RESTRICTED TEV MOVEMENT 2 Neighboring gene sucrose-phosphatase 2 Neighboring gene ABC transporter I family member 6, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC105770660

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068569.1 Reference ASM2569854v1 Primary Assembly

    Range
    27262314..27267084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052631436.1 → XP_052487396.1  uncharacterized protein LOC105770660 isoform X1

  2. XM_012591966.2 → XP_012447420.1  uncharacterized protein LOC105770660 isoform X2

    See identical proteins and their annotated locations for XP_012447420.1

    UniProtKB/TrEMBL
    A0A0D2UW64, A0A7J8Q3S7
    Conserved Domains (3) summary
    COG1472
    Location:44 → 452
    BglX; Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]
    pfam01915
    Location:409 → 597
    Glyco_hydro_3_C; Glycosyl hydrolase family 3 C-terminal domain
    cl07971
    Location:46 → 372
    Glyco_hydro_3; Glycosyl hydrolase family 3 N terminal domain
Nucleotide Protein
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