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LOC105765049 beta-amylase 3, chloroplastic [ Gossypium raimondii (Peruvian cotton) ]

Gene ID: 105765049, updated on 23-Nov-2023

Summary

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Gene symbol
LOC105765049
Gene description
beta-amylase 3, chloroplastic
Locus tag
B456_008G230100
Gene type
protein coding
RefSeq status
MODEL
Organism
Gossypium raimondii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Genomic context

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See LOC105765049 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM2569854v1 (GCF_025698545.1) 12 NC_068576.1 (52230166..52232798)
100 previous assembly Graimondii2_0 (GCF_000327365.1) 8 NC_026936.1 (51641241..51643929)

Chromosome 12 - NC_068576.1Genomic Context describing neighboring genes Neighboring gene FCS-Like Zinc finger 2 Neighboring gene uncharacterized LOC105765050 Neighboring gene probable serine/threonine-protein kinase PBL19 Neighboring gene 60S ribosomal protein L37a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amylase 3, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2569854v1 Primary Assembly

Genomic

  1. NC_068576.1 Reference ASM2569854v1 Primary Assembly

    Range
    52230166..52232798
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012583944.2 → XP_012439398.1  beta-amylase 3, chloroplastic

    See identical proteins and their annotated locations for XP_012439398.1

    UniProtKB/TrEMBL
    A0A0D2T5C1, A0A0D2TB52
    Conserved Domains (1) summary
    PLN02803
    Location:1 → 540
    PLN02803; beta-amylase
Nucleotide Protein
Heading Accession and Version

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