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SIGLEC1 sialic acid binding Ig like lectin 1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 105749242, updated on 13-Mar-2024

Summary

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Gene symbol
SIGLEC1
Gene description
sialic acid binding Ig like lectin 1
See related
Ensembl:ENSSHAG00000000177
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See SIGLEC1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (21812315..21861664, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003821128.1 (41..9405)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene zinc-alpha-2-glycoprotein-like Neighboring gene zinc-alpha-2-glycoprotein Neighboring gene uncharacterized LOC116421243 Neighboring gene sialoadhesin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LOW QUALITY PROTEIN: sialoadhesin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    21812315..21861664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031949744.1 → XP_031805604.1  LOW QUALITY PROTEIN: sialoadhesin

    UniProtKB/TrEMBL
    A0A7N4P7K6
    Related
    ENSSHAP00000032871.1, ENSSHAT00000044893.1
    Conserved Domains (6) summary
    smart00409
    Location:895 → 972
    IG; Immunoglobulin
    smart00410
    Location:1080 → 1151
    IG_like; Immunoglobulin like
    pfam13895
    Location:519 → 590
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:244 → 311
    Ig_3; Immunoglobulin domain
    cd00096
    Location:21 → 25
    Ig; Ig strand A [structural motif]
    cl11960
    Location:21 → 138
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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