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GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 [ Orcinus orca (killer whale) ]

Gene ID: 105747699, updated on 13-Mar-2024

Summary

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Gene symbol
GALNT4
Gene description
polypeptide N-acetylgalactosaminyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Orcinus orca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus
Orthologs
human mouse all
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Genomic context

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See GALNT4 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_02 current mOrcOrc1.1 (GCF_937001465.1) 11 NC_064569.1 (72519443..72524446, complement)

Chromosome 11 - NC_064569.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene DNA repair protein RAD51 homolog 1 Neighboring gene POC1 centriolar protein B Neighboring gene ATPase plasma membrane Ca2+ transporting 1 Neighboring gene uncharacterized LOC125960539

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_064569.1 Chromosome 11 Reference mOrcOrc1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_937001465.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrcOrc1.1 Primary Assembly

Genomic

  1. NC_064569.1 Reference mOrcOrc1.1 Primary Assembly

    Range
    72519443..72524446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004285110.4 → XP_004285158.1  polypeptide N-acetylgalactosaminyltransferase 4

    See identical proteins and their annotated locations for XP_004285158.1

    Conserved Domains (2) summary
    cd02510
    Location:142 → 436
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:450 → 578
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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