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LOC105670039 protein O-mannosyl-transferase TMTC1-like [ Linepithema humile (Argentine ant) ]

Gene ID: 105670039, updated on 1-Oct-2024

Summary

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Gene symbol
LOC105670039
Gene description
protein O-mannosyl-transferase TMTC1-like
See related
EnsemblRapid:LOC105670039
Gene type
protein coding
RefSeq status
MODEL
Organism
Linepithema humile
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dolichoderinae; Linepithema
Orthologs
honey bee all
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Genomic context

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See LOC105670039 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current Lhum_UNIL_v1.0 (GCF_040581485.1) 7 NC_090134.1 (18491469..18632939)
100 previous assembly Lhum_UMD_V04 (GCF_000217595.1) Unplaced Scaffold NW_012160620.1 (796692..922384, complement)

Chromosome 7 - NC_090134.1Genomic Context describing neighboring genes Neighboring gene dipeptidase 1 Neighboring gene UDP-glycosyltransferase UGT5 Neighboring gene uncharacterized LOC137001221 Neighboring gene myrosinase 1-like Neighboring gene UDP-glucosyltransferase 2-like Neighboring gene torso-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040581485.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lhum_UNIL_v1.0 Primary Assembly

Genomic

  1. NC_090134.1 Reference Lhum_UNIL_v1.0 Primary Assembly

    Range
    18491469..18632939
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067359564.1 → XP_067215665.1  protein O-mannosyl-transferase TMTC1-like isoform X2

  2. XM_012363334.2 → XP_012218757.1  protein O-mannosyl-transferase TMTC1-like isoform X1

    Related
    XP_012218757.1
    Conserved Domains (4) summary
    sd00006
    Location:493 → 521
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:302 → 374
    DUF1736; Domain of unknown function (DUF1736)
    pfam13181
    Location:557 → 588
    TPR_8; Tetratricopeptide repeat
    pfam13414
    Location:527 → 588
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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