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LOC105648376 mRNA cap guanine-N7 methyltransferase 2 [ Jatropha curcas ]

Gene ID: 105648376, updated on 25-Jan-2024

Summary

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Gene symbol
LOC105648376
Gene description
mRNA cap guanine-N7 methyltransferase 2
Locus tag
JCGZ_01542
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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See LOC105648376 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023591140.1 (74154..77548)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124095.1 (3176444..3181209, complement)

NW_023591140.1Genomic Context describing neighboring genes Neighboring gene disease resistance protein RPV1-like Neighboring gene dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial Neighboring gene uncharacterized protein HI_0077 Neighboring gene pyruvate kinase 1, cytosolic Neighboring gene uncharacterized LOC105648357

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global analysis of transcriptome responses and gene expression profiles to cold stress of Jatropha curcas L. Wang H, et al. PLoS One, 2013. PMID 24349370, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 5'-cap (guanine-N7-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 7-methylguanosine mRNA capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA cap guanine-N7 methyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023591140.1 Reference RJC1_Hi-C Primary Assembly

    Range
    74154..77548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012234745.3 → XP_012090135.1  mRNA cap guanine-N7 methyltransferase 2 isoform X1

    Conserved Domains (2) summary
    COG0500
    Location:1 → 149
    SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
    cl17173
    Location:8 → 298
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_012234753.3 → XP_012090143.1  mRNA cap guanine-N7 methyltransferase 2 isoform X2

    See identical proteins and their annotated locations for XP_012090143.1

    UniProtKB/TrEMBL
    A0A067L9E6
    Conserved Domains (2) summary
    COG0500
    Location:1 → 149
    SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
    cl17173
    Location:8 → 288
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_037639121.1 → XP_037495049.1  mRNA cap guanine-N7 methyltransferase 2 isoform X3

    Conserved Domains (1) summary
    cl17173
    Location:8 → 153
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  4. XM_020684190.2 → XP_020539849.1  mRNA cap guanine-N7 methyltransferase 2 isoform X4

    Conserved Domains (1) summary
    cl17173
    Location:8 → 250
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
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