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LOC105646937 callose synthase 12 [ Jatropha curcas ]

Gene ID: 105646937, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105646937
Gene description
callose synthase 12
Locus tag
JCGZ_25786
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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See LOC105646937 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590567.1 (2194073..2200856)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124992.1 (443787..450572, complement)

NW_023590567.1Genomic Context describing neighboring genes Neighboring gene CASP-like protein 1C1 Neighboring gene mediator of RNA polymerase II transcription subunit 15 Neighboring gene small nucleolar RNA J33 Neighboring gene serine/threonine-protein kinase BIK1 Neighboring gene calcium-transporting ATPase 8, plasma membrane-type

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023590567.1 Reference RJC1_Hi-C Primary Assembly

    Range
    2194073..2200856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012232895.3 → XP_012088285.1  callose synthase 12

    See identical proteins and their annotated locations for XP_012088285.1

    UniProtKB/TrEMBL
    A0A067JX73
    Conserved Domains (3) summary
    pfam02364
    Location:873 → 1637
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:169 → 270
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
    cl19950
    Location:788 → 956
    Sec3_C; Exocyst complex component Sec3
Nucleotide Protein
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