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LOC105646640 mRNA-capping enzyme [ Jatropha curcas ]

Gene ID: 105646640, updated on 11-Apr-2024

Summary

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Gene symbol
LOC105646640
Gene description
mRNA-capping enzyme
Locus tag
JCGZ_25057
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023591140.1 (3962382..3976533)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124966.1 (627871..641847, complement)

NW_023591140.1Genomic Context describing neighboring genes Neighboring gene acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic Neighboring gene steroid 5-alpha-reductase DET2 Neighboring gene protein DEFECTIVE IN EXINE FORMATION 1 Neighboring gene uncharacterized LOC105646638

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA ligase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA 5'-triphosphate monophosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA guanylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine/serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 7-methylguanosine mRNA capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mRNA-capping enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023591140.1 Reference RJC1_Hi-C Primary Assembly

    Range
    3962382..3976533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012232528.2 → XP_012087918.1  mRNA-capping enzyme

    See identical proteins and their annotated locations for XP_012087918.1

    UniProtKB/TrEMBL
    A0A067JNU6
    Conserved Domains (4) summary
    cd07895
    Location:323 → 551
    Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
    COG5226
    Location:315 → 676
    CEG1; mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification]
    pfam03919
    Location:555 → 648
    mRNA_cap_C; mRNA capping enzyme, C-terminal domain
    cl21483
    Location:140 → 242
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  2. XM_012232529.3 → XP_012087919.1  mRNA-capping enzyme

    See identical proteins and their annotated locations for XP_012087919.1

    UniProtKB/TrEMBL
    A0A067JNU6
    Conserved Domains (4) summary
    cd07895
    Location:323 → 551
    Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
    COG5226
    Location:315 → 676
    CEG1; mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification]
    pfam03919
    Location:555 → 648
    mRNA_cap_C; mRNA capping enzyme, C-terminal domain
    cl21483
    Location:140 → 242
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...

  3. XM_012232530.3 → XP_012087920.1  mRNA-capping enzyme

    See identical proteins and their annotated locations for XP_012087920.1

    UniProtKB/TrEMBL
    A0A067JNU6
    Conserved Domains (4) summary
    cd07895
    Location:323 → 551
    Adenylation_mRNA_capping; Adenylation domain of GTP-dependent mRNA capping enzymes
    COG5226
    Location:315 → 676
    CEG1; mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification]
    pfam03919
    Location:555 → 648
    mRNA_cap_C; mRNA capping enzyme, C-terminal domain
    cl21483
    Location:140 → 242
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
Nucleotide Protein
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