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LOC105643147 pectinesterase 2 [ Jatropha curcas ]

Gene ID: 105643147, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105643147
Gene description
pectinesterase 2
Locus tag
JCGZ_14551
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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See LOC105643147 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590678.1 (514144..517212, complement)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124637.1 (3885568..3888698)

NW_023590678.1Genomic Context describing neighboring genes Neighboring gene auxin-responsive protein SAUR36 Neighboring gene plasmodesmata-located protein 8 Neighboring gene probable pectinesterase/pectinesterase inhibitor 36 Neighboring gene methionine aminopeptidase 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023590678.1 Reference RJC1_Hi-C Primary Assembly

    Range
    514144..517212 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012228218.3 → XP_012083608.1  pectinesterase 2

    See identical proteins and their annotated locations for XP_012083608.1

    UniProtKB/TrEMBL
    A0A067K938
    Conserved Domains (2) summary
    pfam01095
    Location:203 → 500
    Pectinesterase; Pectinesterase
    pfam04043
    Location:28 → 167
    PMEI; Plant invertase/pectin methylesterase inhibitor
Nucleotide Protein
Heading Accession and Version

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