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LOC105640656 probable UDP-arabinopyranose mutase 2 [ Jatropha curcas ]

Gene ID: 105640656, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105640656
Gene description
probable UDP-arabinopyranose mutase 2
Locus tag
JCGZ_11751
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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See LOC105640656 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590909.1 (3018788..3021641, complement)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124487.1 (3007501..3010150)

NW_023590909.1Genomic Context describing neighboring genes Neighboring gene F-box protein At5g49610-like Neighboring gene squamosa promoter-binding-like protein 6 Neighboring gene histone H4-like Neighboring gene COBRA-like protein 4 Neighboring gene protein COBRA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable UDP-arabinopyranose mutase 2
Names
alpha-1,4-glucan-protein synthase [UDP-forming] 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023590909.1 Reference RJC1_Hi-C Primary Assembly

    Range
    3018788..3021641 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012225025.3 → XP_012080415.1  probable UDP-arabinopyranose mutase 2

    See identical proteins and their annotated locations for XP_012080415.1

    UniProtKB/TrEMBL
    A0A067KGI6
    Conserved Domains (1) summary
    PLN03180
    Location:6 → 348
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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