U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105631322 pectinesterase [ Jatropha curcas ]

Gene ID: 105631322, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC105631322
Gene description
pectinesterase
Locus tag
JCGZ_24626
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105631322 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023591708.1 (1594308..1597276)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124182.1 (992976..995938)

NW_023591708.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105631320 Neighboring gene pumilio homolog 23 Neighboring gene pectinesterase 3 Neighboring gene mediator of RNA polymerase II transcription subunit 9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pectinesterase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023591708.1 Reference RJC1_Hi-C Primary Assembly

    Range
    1594308..1597276
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012213403.3 → XP_012068793.1  pectinesterase

    See identical proteins and their annotated locations for XP_012068793.1

    UniProtKB/TrEMBL
    A0A067KWU1
    Conserved Domains (3) summary
    PLN02313
    Location:11 → 581
    PLN02313; Pectinesterase/pectinesterase inhibitor
    cd15798
    Location:64 → 221
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    pfam01095
    Location:270 → 567
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases