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LOC105627963 apoptotic chromatin condensation inducer in the nucleus [ Jatropha curcas ]

Gene ID: 105627963, updated on 14-Dec-2023

Summary

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Gene symbol
LOC105627963
Gene description
apoptotic chromatin condensation inducer in the nucleus
Locus tag
JCGZ_24108
Gene type
protein coding
RefSeq status
MODEL
Organism
Jatropha curcas
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Genomic context

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See LOC105627963 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590999.1 (108233..113783, complement)
101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124061.1 (1045312..1050856)

NW_023590999.1Genomic Context describing neighboring genes Neighboring gene phospholipase A1-II 1 Neighboring gene histone deacetylase 2-like Neighboring gene 60S ribosomal protein L30 Neighboring gene N-terminal acetyltransferase B complex catalytic subunit NAA20 Neighboring gene MICOS complex subunit MIC60

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
apoptotic chromatin condensation inducer in the nucleus

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RJC1_Hi-C Primary Assembly

Genomic

  1. NW_023590999.1 Reference RJC1_Hi-C Primary Assembly

    Range
    108233..113783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012209247.3 → XP_012064637.1  apoptotic chromatin condensation inducer in the nucleus

    See identical proteins and their annotated locations for XP_012064637.1

    UniProtKB/TrEMBL
    A0A067LQN5
    Conserved Domains (3) summary
    smart00513
    Location:13 → 47
    SAP; Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
    cd12432
    Location:509 → 593
    RRM_ACINU; RNA recognition motif in apoptotic chromatin condensation inducer in the nucleus (acinus) and similar proteins
    pfam16294
    Location:665 → 705
    RSB_motif; RNSP1-SAP18 binding (RSB) motif
Nucleotide Protein
Heading Accession and Version

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