U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC105617990 apoptotic protease-activating factor 1-like [ Atta cephalotes ]

Gene ID: 105617990, updated on 1-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC105617990
Gene description
apoptotic protease-activating factor 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Atta cephalotes
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
Orthologs
honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC105617990 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Attacep1.0 (GCF_000143395.1) Unplaced Scaffold NW_012130079.1 (2053194..2059516)

NW_012130079.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene mitochondrial pyruvate carrier 3-like Neighboring gene Synapse-associated protein 47kD

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_012130079.1 Unplaced Scaffold Reference Attacep1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
apoptotic protease-activating factor 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Atta cephalotes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Attacep1.0

Genomic

  1. NW_012130079.1 Reference Attacep1.0

    Range
    2053194..2059516
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012199527.1 → XP_012054917.1  apoptotic protease-activating factor 1-like

    UniProtKB/TrEMBL
    A0A158NBK9
    Conserved Domains (6) summary
    COG2319
    Location:607 → 1052
    WD40; WD40 repeat [General function prediction only]
    pfam00931
    Location:121 → 402
    NB-ARC; NB-ARC domain
    pfam10443
    Location:121 → 165
    RNA12; RNA12 protein
    sd00039
    Location:620 → 656
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:726 → 949
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl14633
    Location:1 → 87
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases