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SEPTIN5 septin 5 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105601287, updated on 13-Mar-2024

Summary

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Gene symbol
SEPTIN5
Gene description
septin 5
See related
Ensembl:ENSCATG00000040593
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Also known as
SEPT5
Orthologs
human mouse all
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Genomic context

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See SEPTIN5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002777.1 (603546..612390, complement)

NW_012002777.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105601283 Neighboring gene glycoprotein Ib platelet subunit beta Neighboring gene uncharacterized LOC105601288 Neighboring gene claudin 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012002777.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012002777.1 Reference Caty_1.0

    Range
    603546..612390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012093393.1 → XP_011948783.1  septin-5 isoform X3

    See identical proteins and their annotated locations for XP_011948783.1

    UniProtKB/TrEMBL
    A0A2K5ND95
    Related
    ENSCATP00000035472.1, ENSCATT00000059754.1
    Conserved Domains (1) summary
    pfam00735
    Location:42 → 313
    Septin

  2. XM_012093394.1 → XP_011948784.1  septin-5 isoform X4

    Conserved Domains (2) summary
    COG5019
    Location:236 → 582
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00735
    Location:254 → 526
    Septin; Septin

  3. XM_012093392.1 → XP_011948782.1  septin-5 isoform X2

    See identical proteins and their annotated locations for XP_011948782.1

    UniProtKB/TrEMBL
    A0A2K5NDH5
    Related
    ENSCATP00000035476.1, ENSCATT00000059758.1
    Conserved Domains (1) summary
    pfam00735
    Location:51 → 322
    Septin

  4. XM_012093391.1 → XP_011948781.1  septin-5 isoform X1

    Conserved Domains (1) summary
    pfam00735
    Location:103 → 374
    Septin; Septin

  5. XM_012093395.1 → XP_011948785.1  septin-5 isoform X5

    Conserved Domains (1) summary
    pfam00735
    Location:50 → 280
    Septin; Septin
Nucleotide Protein
Heading Accession and Version

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