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SAR1B secretion associated Ras related GTPase 1B [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105599781, updated on 13-Mar-2024

Summary

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Gene symbol
SAR1B
Gene description
secretion associated Ras related GTPase 1B
See related
Ensembl:ENSCATG00000022601
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See SAR1B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012002512.1 (14468567..14507249, complement)

NW_012002512.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105599775 Neighboring gene protein PRRC2A-like Neighboring gene jade family PHD finger 2 Neighboring gene uncharacterized LOC105599780 Neighboring gene SEC24 homolog A, COPII coat complex component Neighboring gene calcium modulating ligand

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012002512.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of COPII vesicle coating IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP-binding protein SAR1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012002512.1 Reference Caty_1.0

    Range
    14468567..14507249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012090293.1 → XP_011945683.1  GTP-binding protein SAR1b isoform X2

    See identical proteins and their annotated locations for XP_011945683.1

    UniProtKB/TrEMBL
    A0A2K5L3V0
    Related
    ENSCATP00000007622.1, ENSCATT00000026194.1
    Conserved Domains (1) summary
    cd00879
    Location:3 → 197
    Sar1; Sar1 is an essential component of COPII vesicle coats

  2. XM_012090294.1 → XP_011945684.1  GTP-binding protein SAR1b isoform X2

    See identical proteins and their annotated locations for XP_011945684.1

    UniProtKB/TrEMBL
    A0A2K5L3V0
    Conserved Domains (1) summary
    cd00879
    Location:3 → 197
    Sar1; Sar1 is an essential component of COPII vesicle coats

  3. XM_012090292.1 → XP_011945682.1  GTP-binding protein SAR1b isoform X1

    Conserved Domains (2) summary
    smart00178
    Location:75 → 252
    SAR; Sar1p-like members of the Ras-family of small GTPases
    cd00879
    Location:75 → 252
    Sar1; Sar1 is an essential component of COPII vesicle coats
Nucleotide Protein
Heading Accession and Version

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