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ANO5 anoctamin 5 [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105593113, updated on 13-Mar-2024

Summary

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Gene symbol
ANO5
Gene description
anoctamin 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See ANO5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001484.1 (3743891..3844591, complement)

NW_012001484.1Genomic Context describing neighboring genes Neighboring gene FA complementation group F Neighboring gene solute carrier family 17 member 6 Neighboring gene uncharacterized LOC105593111 Neighboring gene uncharacterized LOC105593115 Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene uncharacterized LOC105593118 Neighboring gene neural EGFL like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001484.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001484.1 Reference Caty_1.0

    Range
    3743891..3844591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012075958.1 → XP_011931348.1  anoctamin-5 isoform X4

    Conserved Domains (2) summary
    pfam04547
    Location:544 → 1121
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:324 → 541
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_012075957.1 → XP_011931347.1  anoctamin-5 isoform X3

    Conserved Domains (2) summary
    pfam04547
    Location:546 → 1123
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:326 → 543
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin

  3. XM_012075956.1 → XP_011931346.1  anoctamin-5 isoform X2

    Conserved Domains (2) summary
    pfam04547
    Location:560 → 1137
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:340 → 557
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin

  4. XM_012075955.1 → XP_011931345.1  anoctamin-5 isoform X1

    See identical proteins and their annotated locations for XP_011931345.1

    Conserved Domains (2) summary
    pfam04547
    Location:561 → 1138
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:341 → 558
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin

  5. XM_012075954.1 → XP_011931344.1  anoctamin-5 isoform X1

    See identical proteins and their annotated locations for XP_011931344.1

    Conserved Domains (2) summary
    pfam04547
    Location:561 → 1138
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:341 → 558
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin

  6. XM_012075959.1 → XP_011931349.1  anoctamin-5 isoform X5

    Conserved Domains (2) summary
    pfam04547
    Location:561 → 887
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:341 → 558
    Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
Heading Accession and Version

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