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AGL amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105590153, updated on 20-Oct-2024

Summary

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Gene symbol
AGL
Gene description
amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase
See related
Ensembl:ENSCATG00000038784
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See AGL in Genome Data Viewer
Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012001076.1 (5803996..5875456, complement)

NW_012001076.1Genomic Context describing neighboring genes Neighboring gene UDP-N-acetylglucosamine transporter Neighboring gene UDP-N-acetylglucosamine transporter-like Neighboring gene ferric chelate reductase 1 Neighboring gene high mobility group protein B3 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012001076.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amylo-alpha-1,6-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: glycogen debranching enzyme
Names
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012001076.1 Reference Caty_1.0

    Range
    5803996..5875456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012069404.1 → XP_011924794.1  LOW QUALITY PROTEIN: glycogen debranching enzyme

    UniProtKB/TrEMBL
    A0A2K5N1H9
    Related
    ENSCATP00000031324.1, ENSCATT00000055589.1
    Conserved Domains (4) summary
    cd11327
    Location:105 → 583
    AmyAc_Glg_debranch_2; Alpha amylase catalytic domain found in glycogen debranching enzymes
    TIGR01531
    Location:22 → 1532
    glyc_debranch; glycogen debranching enzymye
    pfam06202
    Location:1042 → 1527
    GDE_C; Amylo-alpha-1,6-glucosidase
    pfam14702
    Location:697 → 974
    hGDE_central; central domain of human glycogen debranching enzyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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