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CHRNE cholinergic receptor nicotinic epsilon subunit [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105583452, updated on 13-Mar-2024

Summary

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Gene symbol
CHRNE
Gene description
cholinergic receptor nicotinic epsilon subunit
See related
Ensembl:ENSCATG00000042709
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See CHRNE in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012000250.1 (11049658..11065436)

NW_012000250.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 167 Neighboring gene solute carrier family 25 member 11 Neighboring gene glycoprotein Ib platelet subunit alpha Neighboring gene chromosome unknown open reading frame, human C17orf107 Neighboring gene misshapen like kinase 1 Neighboring gene uncharacterized LOC105584484 Neighboring gene phospholipase D2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012000250.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012000250.1 Reference Caty_1.0

    Range
    11049658..11065436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012055265.1 → XP_011910655.1  acetylcholine receptor subunit epsilon isoform X3

    Conserved Domains (1) summary
    pfam02932
    Location:1 → 162
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  2. XM_012055248.1 → XP_011910638.1  acetylcholine receptor subunit epsilon isoform X1

    UniProtKB/TrEMBL
    A0A2K5NSH0
    Related
    ENSCATP00000040271.1, ENSCATT00000064591.1
    Conserved Domains (3) summary
    TIGR00860
    Location:21 → 475
    LIC; Cation transporter family protein
    pfam02931
    Location:24 → 240
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:247 → 474
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

  3. XM_012055258.1 → XP_011910648.1  acetylcholine receptor subunit epsilon isoform X2

    Conserved Domains (3) summary
    TIGR00860
    Location:21 → 460
    LIC; Cation transporter family protein
    pfam02931
    Location:24 → 225
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:232 → 459
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region
Nucleotide Protein
Heading Accession and Version

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