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SGCD sarcoglycan delta [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105581550, updated on 13-Mar-2024

Summary

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Gene symbol
SGCD
Gene description
sarcoglycan delta
See related
Ensembl:ENSCATG00000045363
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012007035.1 (62895..499407)

NW_012007035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105581549 Neighboring gene apolipoprotein O pseudogene Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene hepatitis A virus cellular receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012007035.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012007035.1 Reference Caty_1.0

    Range
    62895..499407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012050798.1 → XP_011906188.1  delta-sarcoglycan isoform X1

    See identical proteins and their annotated locations for XP_011906188.1

    UniProtKB/TrEMBL
    A0A2K5P8K1
    Related
    ENSCATP00000046036.1, ENSCATT00000070487.1
    Conserved Domains (1) summary
    pfam04790
    Location:24 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_012050799.1 → XP_011906189.1  delta-sarcoglycan isoform X2

    See identical proteins and their annotated locations for XP_011906189.1

    Conserved Domains (1) summary
    pfam04790
    Location:23 → 277
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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