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AGPS alkylglycerone phosphate synthase [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105579864, updated on 13-Mar-2024

Summary

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Gene symbol
AGPS
Gene description
alkylglycerone phosphate synthase
See related
Ensembl:ENSCATG00000038387
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See AGPS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012006153.1 (8753405..8922860)

NW_012006153.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit TIM14 pseudogene Neighboring gene NFE2 like bZIP transcription factor 2 Neighboring gene uncharacterized LOC105579865 Neighboring gene uncharacterized LOC105579863 Neighboring gene tetratricopeptide repeat protein 30B Neighboring gene tetratricopeptide repeat protein 30A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012006153.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alkylglycerone-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkyldihydroxyacetonephosphate synthase, peroxisomal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012006153.1 Reference Caty_1.0

    Range
    8753405..8922860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012047093.1 → XP_011902483.1  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X1

    UniProtKB/TrEMBL
    A0A2K5MYU4
    Related
    ENSCATP00000030412.1, ENSCATT00000054675.1
    Conserved Domains (3) summary
    COG0277
    Location:226 → 678
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:232 → 373
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:411 → 683
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain

  2. XM_012047095.1 → XP_011902485.1  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X3

    Conserved Domains (3) summary
    COG0277
    Location:226 → 450
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:232 → 373
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:411 → 578
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain

  3. XM_012047097.1 → XP_011902487.1  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X5

    Conserved Domains (3) summary
    COG0277
    Location:110 → 562
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:116 → 257
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:295 → 567
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain

  4. XM_012047094.1 → XP_011902484.1  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X2

    Conserved Domains (3) summary
    COG0277
    Location:179 → 631
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:185 → 326
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:364 → 636
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain

  5. XM_012047096.1 → XP_011902486.1  alkyldihydroxyacetonephosphate synthase, peroxisomal isoform X4

    Conserved Domains (3) summary
    COG0277
    Location:143 → 595
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:149 → 290
    FAD_binding_4; FAD binding domain
    pfam02913
    Location:328 → 600
    FAD-oxidase_C; FAD linked oxidases, C-terminal domain
Nucleotide Protein
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