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RAB39B RAB39B, member RAS oncogene family [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105573755, updated on 13-Mar-2024

Summary

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Gene symbol
RAB39B
Gene description
RAB39B, member RAS oncogene family
See related
Ensembl:ENSCATG00000034919
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See RAB39B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012003514.1 (64585..70317)

NW_012003514.1Genomic Context describing neighboring genes Neighboring gene chloride intracellular channel 2 Neighboring gene uncharacterized LOC105573754 Neighboring gene VHL binding protein 1 Neighboring gene BRCA1/BRCA2-containing complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012003514.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-39B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012003514.1 Reference Caty_1.0

    Range
    64585..70317
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012033879.1 → XP_011889269.1  ras-related protein Rab-39B

    See identical proteins and their annotated locations for XP_011889269.1

    UniProtKB/TrEMBL
    A0A2K5MBJ2
    Related
    ENSCATP00000022592.1, ENSCATT00000046803.1
    Conserved Domains (1) summary
    cd04111
    Location:7 → 213
    Rab39; Rab GTPase family 39 (Rab39)
Nucleotide Protein
Heading Accession and Version

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