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AMT aminomethyltransferase [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105573692, updated on 13-Mar-2024

Summary

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Gene symbol
AMT
Gene description
aminomethyltransferase
See related
Ensembl:ENSCATG00000040549
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See AMT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012003502.1 (5247841..5255995, complement)

NW_012003502.1Genomic Context describing neighboring genes Neighboring gene ras homolog family member A Neighboring gene T cell leukemia translocation altered Neighboring gene nicolin 1, tubulin polyglutamylase complex subunit Neighboring gene dystroglycan 1 Neighboring gene bassoon presynaptic cytomatrix protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012003502.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aminomethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aminomethyltransferase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012003502.1 Reference Caty_1.0

    Range
    5247841..5255995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012033696.1 → XP_011889086.1  aminomethyltransferase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_011889086.1

    UniProtKB/TrEMBL
    A0A2K5NDA8
    Conserved Domains (1) summary
    cl01893
    Location:16 → 400
    GCV_T; Aminomethyltransferase folate-binding domain

  2. XM_012033695.1 → XP_011889085.1  aminomethyltransferase, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_011889085.1

    UniProtKB/TrEMBL
    A0A2K5NDA8
    Related
    ENSCATP00000035486.1, ENSCATT00000059768.1
    Conserved Domains (1) summary
    cl01893
    Location:16 → 400
    GCV_T; Aminomethyltransferase folate-binding domain

  3. XM_012033699.1 → XP_011889089.1  aminomethyltransferase, mitochondrial isoform X4

    See identical proteins and their annotated locations for XP_011889089.1

    Conserved Domains (2) summary
    pfam01571
    Location:2 → 194
    GCV_T; Aminomethyltransferase folate-binding domain
    pfam08669
    Location:204 → 295
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain

  4. XM_012033698.1 → XP_011889088.1  aminomethyltransferase, mitochondrial isoform X3

    See identical proteins and their annotated locations for XP_011889088.1

    UniProtKB/TrEMBL
    A0A2K5NDA8, A0A2K5NDD0
    Related
    ENSCATP00000035469.1, ENSCATT00000059751.1
    Conserved Domains (1) summary
    cl26709
    Location:35 → 344
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain

  5. XM_012033697.1 → XP_011889087.1  aminomethyltransferase, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_011889087.1

    UniProtKB/TrEMBL
    A0A2K5NDA8
    Related
    ENSCATP00000035480.1, ENSCATT00000059762.1
    Conserved Domains (3) summary
    PLN02319
    Location:16 → 400
    PLN02319; aminomethyltransferase
    pfam01571
    Location:39 → 291
    GCV_T; Aminomethyltransferase folate-binding domain
    pfam08669
    Location:301 → 392
    GCV_T_C; Glycine cleavage T-protein C-terminal barrel domain
Nucleotide Protein
Heading Accession and Version

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