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IRGC immunity related GTPase cinema [ Cercocebus atys (sooty mangabey) ]

Gene ID: 105572261, updated on 13-Mar-2024

Summary

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Gene symbol
IRGC
Gene description
immunity related GTPase cinema
See related
Ensembl:ENSCATG00000016103
Gene type
protein coding
RefSeq status
MODEL
Organism
Cercocebus atys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Cercocebus
Orthologs
human mouse all
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Genomic context

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See IRGC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Caty_1.0 (GCF_000955945.1) Unplaced Scaffold NW_012003064.1 (682123..684476, complement)

NW_012003064.1Genomic Context describing neighboring genes Neighboring gene potassium calcium-activated channel subfamily N member 4 Neighboring gene uncharacterized LOC105572264 Neighboring gene SMG9 nonsense mediated mRNA decay factor Neighboring gene uncharacterized LOC105572291 Neighboring gene plasminogen activator, urokinase receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012003064.1 Unplaced Scaffold Reference Caty_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon-inducible GTPase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cercocebus atys Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caty_1.0

Genomic

  1. NW_012003064.1 Reference Caty_1.0

    Range
    682123..684476 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012030742.1 → XP_011886132.1  interferon-inducible GTPase 5

    UniProtKB/TrEMBL
    A0A2K5KVD1
    Related
    ENSCATP00000004664.1, ENSCATT00000018364.1
    Conserved Domains (2) summary
    cd04104
    Location:160 → 356
    p47_IIGP_like; p47 GTPase family includes IGTP, TGTP/Mg21, IRG-47, GTPI, LRG-47, and IIGP1
    pfam05049
    Location:128 → 509
    IIGP; Interferon-inducible GTPase (IIGP)
Nucleotide Protein
Heading Accession and Version

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